Escherichia coli Sequence Type 457 Is an Emerging Extended-Spectrum-β-Lactam-Resistant Lineage with Reservoirs in Wildlife and Food-Producing Animals

Author:

Nesporova Kristina12,Wyrsch Ethan R.3,Valcek Adam124,Bitar Ibrahim14,Chaw Khin56,Harris Patrick56,Hrabak Jaroslav4,Literak Ivan12,Djordjevic Steven P.3,Dolejska Monika124ORCID

Affiliation:

1. CEITEC VFU Brno, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czech Republic

2. Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czech Republic

3. The ithree institute, University of Technology Sydney, Sydney, New South Wales, Australia

4. Faculty of Medicine, Biomedical Center, Charles University, Pilsen, Czech Republic

5. Faculty of Medicine, University of Queensland, UQ Centre for Clinical Research, Brisbane, Australia

6. Pathology Queensland, Brisbane, Australia

Abstract

Silver gulls carry phylogenetically diverse Escherichia coli , including globally dominant extraintestinal pathogenic E. coli (ExPEC) sequence types and pandemic ExPEC-ST131 clades; however, our large-scale study (504 samples) on silver gulls nesting off the coast of New South Wales identified E. coli ST457 as the most prevalent. A phylogenetic analysis of whole-genome sequences (WGS) of 138 ST457 samples comprising 42 from gulls, 2 from humans (Australia), and 14 from poultry farmed in Paraguay were compared with 80 WGS deposited in public databases from diverse sources and countries.

Funder

Czech Science Foundation

Czech Ministry of Education CEITEC 2020

Charles University Research Fund PROGRES

Medical Research Future Fund Frontier Health and Medical Research Program

Australian Centre for Genomic Epidemiological Microbiology

Publisher

American Society for Microbiology

Subject

Infectious Diseases,Pharmacology (medical),Pharmacology

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