Whole-Genome Sequencing and Virulome Analysis of Escherichia coli Isolated from New Zealand Environments of Contrasting Observed Land Use-Reference-Cited by-同舟云学术

Whole-Genome Sequencing and Virulome Analysis of Escherichia coli Isolated from New Zealand Environments of Contrasting Observed Land Use

Published:2022-05-10 Issue:9 Volume:88 Page:
ISSN:0099-2240
Container-title:Applied and Environmental Microbiology
language:en
Short-container-title:Appl Environ Microbiol

Author:

Cookson Adrian L.¹²^ORCID,Marshall Jonathan C.²³,Biggs Patrick J.²⁴⁵^ORCID,Rogers Lynn E.¹,Collis Rose M.¹²,Devane Megan⁶,Stott Rebecca⁷,Wilkinson David A.²⁵^ORCID,Kamke Janine⁸,Brightwell Gale¹⁵

Affiliation:

1. Food Systems Integrity, AgResearch Limited, Hopkirk Research Institute, Massey University, Palmerston North, New Zealand

2. mEpiLab, School of Veterinary Science, Massey University, Palmerston North, New Zealand

3. School of Mathematics and Computational Sciences, Massey University, Palmerston North, New Zealand

4. School of Natural Sciences, Massey University, Palmerston North, New Zealand

5. New Zealand Food Safety Science and Research Centre, Massey University, Palmerston North, New Zealand

6. Environmental Science and Research Limited, Christchurch, New Zealand

7. National Institute of Water and Atmospheric Research, Hamilton, New Zealand

8. Horizons Regional Council, Palmerston North, New Zealand

Abstract

This study takes a systematic sampling approach to assess the public health risk of Escherichia coli recovered from freshwater sites within forest and farmland. The New Zealand landscape is dominated by livestock farming, and previous work has demonstrated that “recreational exposure to water” is a risk factor for human infection by Shiga toxin-producing Escherichia coli (STEC).

Publisher

American Society for Microbiology

Subject

Ecology,Applied Microbiology and Biotechnology,Food Science,Biotechnology

Link

https://journals.asm.org/doi/pdf/10.1128/aem.00277-22

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