Real-Time Analysis and Visualization of Pathogen Sequence Data-Reference-Cited by-同舟云学术

Real-Time Analysis and Visualization of Pathogen Sequence Data

Published:2018-11 Issue:11 Volume:56 Page:
ISSN:0095-1137
Container-title:Journal of Clinical Microbiology
language:en
Short-container-title:J Clin Microbiol

Author:

Neher Richard A.¹²^ORCID,Bedford Trevor³^ORCID

Affiliation:

1. Biozentrum, University of Basel, Basel, Switzerland

2. SIB Swiss Institute of Bioinformatics, Basel, Switzerland

3. Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA

Abstract

The rapid development of sequencing technologies has to led to an explosion of pathogen sequence data, which are increasingly collected as part of routine surveillance or clinical diagnostics. In public health, sequence data are used to reconstruct the evolution of pathogens, to anticipate future spread, and to target interventions.

Funder

Wellcome Trust

HHS | NIH | NIH Office of the Director

HHS | National Institutes of Health

Pew Charitable Trusts

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

Link

https://journals.asm.org/doi/pdf/10.1128/JCM.00480-18

Reference30 articles.