Complete genome sequences of three commensal and two avian pathogenic <i>Escherichia coli</i> strains isolated from farm animals in Russia-Reference-Cited by-同舟云学术

Complete genome sequences of three commensal and two avian pathogenic Escherichia coli strains isolated from farm animals in Russia

Published:2023-11-16 Issue:11 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Sutormin Dmitry¹^ORCID,Mihailovskaya Veronika²,Trofimova Anna³,Mamontov Victor¹,Kuznetsova Marina²,Severinov Konstantin⁴⁵^ORCID

Affiliation:

1. Center for Molecular and Cellular Biology, Skolkovo Institute of Science and Technology , Moscow, Russia

2. Institute of Ecology and Genetics of Microorganisms, Ural Branch of the Russian Academy of Sciences , Perm, Russia

3. Institute of Gene Biology, Russian Academy of Science , Moscow, Russia

4. Waksman Institute for Microbiology, Rutgers, the State University of New Jersey Piscataway , New Jersey, USA

5. Institute of Molecular Genetics, National Research Center "Kurchatov Institute" , Moscow, Russia

Abstract

ABSTRACT Farm animals are a natural reservoir of commensal and pathogenic Escherichia coli strains with high zoonotic potential. Here, we present five complete genomes of E. coli strains isolated from healthy animals and animals with colisepticemia from farms in Russia. The strains contain diverse virulence-associated and antibiotic resistance genes and multiple plasmids.

Funder

Ministry of Science and Higher Education of the Russian Federation

Government of Perm Krai

Perm Krai state assignment

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00654-23

Reference13 articles.

1. F Plasmids Are the Major Carriers of Antibiotic Resistance Genes in Human-Associated Commensal Escherichia coli

2. Escherichia coli Isolated from Cases of Colibacillosis in Russian Poultry Farms (Perm Krai): Sensitivity to Antibiotics and Bacteriocins

3. Bacteriocin-Producing Escherichia coli Isolated from the Gastrointestinal Tract of Farm Animals: Prevalence, Molecular Characterization and Potential for Application

4. Performance of neural network basecalling tools for Oxford Nanopore sequencing

5. Assembly of long, error-prone reads using repeat graphs