1. Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
2. Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, United Kingdom
3. Department of Biology, Drexel University, Philadelphia, Pennsylvania, USA
4. South African Tuberculosis Vaccine Initiative, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa
5. International AIDS Vaccine Initiative, Human Immunology Laboratory, Imperial College London, London, United Kingdom
6. Modelling and Economics Unit, Centre for Infectious Disease Surveillance and Control, Public Health England, London, United Kingdom
7. MRC Centre for Outbreak Analysis and Modelling, School of Public Health, Imperial College London, London, United Kingdom
8. NIHR Health Protection Research Unit in Modelling Methodology, School of Public Health, Imperial College London, London, United Kingdom
9. Centre for Genomic Pathogen Surveillance, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, United Kingdom