Microbiome Analysis for Wastewater Surveillance during COVID-19

Author:

Brumfield Kyle D.12ORCID,Leddy Menu3,Usmani Moiz4,Cotruvo Joseph A.5,Tien Ching-Tzone6,Dorsey Suzanne6,Graubics Karlis7,Fanelli Brian7,Zhou Isaac7,Registe Nathaniel7,Dadlani Manoj7,Wimalarante Malinda8,Jinasena Dilini8,Abayagunawardena Rushan8,Withanachchi Chiran8,Huq Anwar1,Jutla Antarpreet4,Colwell Rita R.127ORCID

Affiliation:

1. Maryland Pathogen Research Institute, University of Maryland, College Park, Maryland, USA

2. University of Maryland Institute for Advanced Computer Studies, University of Maryland, College Park, Maryland, USA

3. Essential Environmental and Engineering Systems, Huntington Beach, California, USA

4. Geohealth and Hydrology Laboratory, Department of Environmental Engineering Sciences, University of Florida, Gainesville, Florida, USA

5. Joseph Cotruvo and Associates LLC, Washington, DC, USA

6. Maryland Department of Environment, Baltimore, Maryland, USA

7. CosmosID Inc., Germantown, Maryland, USA

8. Inspection Experts Inc., Columbia, Maryland, USA

Abstract

Traditionally, testing for COVID-19 is done by detecting SARS-CoV-2 in samples collected from nasal swabs and/or saliva. However, SARS-CoV-2 can also be detected in feces of infected individuals.

Funder

HHS | National Institutes of Health

National Science Foundation

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

Reference130 articles.

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3. WHO. 2020. WHO Director-General’s remarks at the media briefing on 2019-nCoV on 11 February 2020. https://www.who.int/director-general/speeches/detail/who-director-general-s-remarks-at-the-media-briefing-on-2019-ncov-on-11-february-2020.

4. An interactive web-based dashboard to track COVID-19 in real time

5. WHO. 2020. Modes of transmission of virus causing COVID-19: implications for IPC precaution recommendations: scientific brief, 27 March 2020. World Health Organization. https://apps.who.int/iris/handle/10665/331601.

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