Acquisition of the L452R Mutation in the ACE2-Binding Interface of Spike Protein Triggers Recent Massive Expansion of SARS-CoV-2 Variants

Author:

Tchesnokova Veronika12,Kulasekara Hemantha3,Larson Lydia1,Bowers Victoria4,Rechkina Elena2,Kisiela Dagmara1,Sledneva Yulia2,Choudhury Debarati2,Maslova Iryna2,Deng Kai3,Kutumbaka Kirthi3,Geng Hao3,Fowler Curtis3,Greene Dina56,Ralston James56,Samadpour Mansour3,Sokurenko Evgeni1ORCID

Affiliation:

1. University of Washington, Seattle, Washington, USA

2. ID Genomics, Inc., Seattle, Washington, USA

3. IEH Laboratories and Consulting Group, Seattle, Washington, USA

4. ARMADA (The Antibiotic Resistance Monitoring, Analysis and Diagnostics Alliance), Seattle, Washington, USA

5. Kaiser Permanente Washington (KPWA), Seattle, Washington, USA

6. KPWA Research Institute, Seattle, Washington, USA

Abstract

We report that there is a recent global expansion of numerous independent severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants with mutation L452R in the receptor-binding domain (RBD) of the spike protein. The massive emergence of L452R variants was first linked to lineage B.1.427/B.1.429 (clade 21C) that has been spreading in California since November and December 2020, originally named CAL.20C and currently variant of interest epsilon.

Funder

ARMADA Foundation

ID Genomics

IEH Laboratories and Consulting Group

HHS | National Institutes of Health

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

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