Comprehensive study of several general and type-specific primer pairs for detection of human papillomavirus DNA by PCR in paraffin-embedded cervical carcinomas

Author:

Baay M F1,Quint W G1,Koudstaal J1,Hollema H1,Duk J M1,Burger M P1,Stolz E1,Herbrink P1

Affiliation:

1. Department of Dermatovenereology, Erasmus University, University Hospital, Rotterdam, The Netherlands.

Abstract

We have compared the efficacies of three general primer pairs for the detection of human papillomavirus (HPV) DNA in formaldehyde-fixed paraffin-embedded carcinomas. The use of these primer pairs leads to underestimates of the HPV prevalence (GP5/6, 61.1%; CPI/IIG, 57.4%; MY09/11, 46.9%; combined, 72.8%). The efficacy of each primer pair seemed to be inversely correlated to the length of the amplimer produced. By using newly developed type-specific primer pairs (amplimer length, approximately 100 bp), an increase in HPV DNA detection (87.6%) was found.

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

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