Complete Genome Sequence of Pandoraea pnomenusa TF-18, a Multidrug-Resistant Organism Isolated from the Rhizosphere of Rice (Oryza sativa L. subsp. japonica )-Reference-Cited by-同舟云学术

Complete Genome Sequence of Pandoraea pnomenusa TF-18, a Multidrug-Resistant Organism Isolated from the Rhizosphere of Rice (Oryza sativa L. subsp. japonica )

Published:2020-01-02 Issue:1 Volume:9 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Mangalea Mihnea R.¹,Luna Emily K.²,Ziegle Janet³,Chang Christine³,Bosco-Lauth Angela M.⁴,Bowen Richard A.⁴,Leach Jan E.²,Borlee Bradley R.¹^ORCID

Affiliation:

1. Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, USA

2. Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, Colorado, USA

3. Pacific Biosciences, Menlo Park, California, USA

4. Department of Biomedical Sciences, Colorado State University, Fort Collins, Colorado, USA

Abstract

Pandoraea pnomenusa strain TF-18 was isolated from the roots of rice seedlings on selective medium containing four classes of antibiotics for isolation of Burkholderia pseudomallei . Using Pacific Biosciences (PacBio) single-molecule real-time (SMRT) sequencing technology, we report here a complete genome of 5,499,432 bases, a GC content of 64.8%, and 4,849 coding sequences.

Funder

National Science Foundation

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.01008-19

Reference14 articles.

1. Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov.

2. Complete Genome Sequence of Pandoraea pnomenusa 3kgm, a Quorum-Sensing Strain Isolated from a Former Landfill Site

3. Complete genome of Pandoraea pnomenusa RB-38, an oxalotrophic bacterium isolated from municipal solid waste landfill site

4. Exopolysaccharides produced by Pandoraea shows emulsifying and anti-biofilm activities

5. Identification of Pandoraea Species by 16S Ribosomal DNA-Based PCR Assays

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