Complete Genome Sequences of Three Salmonella Strains Obtained from a Poultry Production Farm in Thailand-Reference-Cited by-同舟云学术

Complete Genome Sequences of Three Salmonella Strains Obtained from a Poultry Production Farm in Thailand

Published:2023-02-16 Issue:2 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Arigul Tantip¹²,Jenjaroenpun Piroon¹²^ORCID,Wankaew Natnicha¹²,Vespirom Juthatip³,Thuamkaew Phatcharaporn⁴,Wongsurawat Thidathip¹²^ORCID,Ledlod Sudarat⁴^ORCID

Affiliation:

1. Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand

2. Siriraj Long-Read Lab (Si-LoL), Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand

3. Laboratory Department, CPF (Thailand), Kangkoi, Saraburi, Thailand

4. Research Department, CPF Food Research and Development Center Co., Ltd., Lamsai, Wangnoi, Phranakhon Si-Ayutthaya, Thailand

Abstract

Here, we report three complete circular genome sequences of Salmonella enterica SalSpp07, SalSpp08, and SalSpp09, which were isolated from chicken meat and skin during quality control on the production line. The genomes were closed using a hybrid assembly method with short and long sequencing reads.

Funder

CPF (Thailand) Public Company limited

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.01104-22

Reference12 articles.

1. Genome-based analysis of infrequent Salmonella serotypes through the Thai pork production chain

2. Salmonella, Food Safety and Food Handling Practices

3. Performance of neural network basecalling tools for Oxford Nanopore sequencing

4. NanoPack: visualizing and processing long-read sequencing data

5. Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads

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