Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth

Author:

Gerlin Léo1,Cottret Ludovic1,Cesbron Sophie2,Taghouti Géraldine2,Jacques Marie-Agnès2,Genin Stéphane1ORCID,Baroukh Caroline1ORCID

Affiliation:

1. LIPM, Université de Toulouse, INRAE, CNRS, Castanet-Tolosan, France

2. IRHS, INRAE, AGROCAMPUS-Ouest, Université d’Angers, Beaucouzé, France

Abstract

Xylella fastidiosa is one of the most important threats to plant health worldwide, causing disease in the Americas on a range of agricultural crops and trees, and recently associated with a critical epidemic affecting olive trees in Europe. A main challenge for the detection of the pathogen and the development of physiological studies is its fastidious growth, as the generation time can vary from 10 to 100 h for some strains. This physiological peculiarity is shared with several human pathogens and is poorly understood. We performed an analysis of the metabolic capabilities of X. fastidiosa through a genome-scale metabolic model of the bacterium. This model was reconstructed and manually curated using experiments and bibliographical evidence. Our study revealed that fastidious growth most probably results from different metabolic specificities such as the absence of highly efficient enzymes or a global inefficiency in virulence factor production. These results support the idea that the fragility of the metabolic network may have been shaped during evolution to lead to the self-limiting behavior of X. fastidiosa .

Funder

French Ministry of National Education and Research

Horizon 2020 Research and Innovation Program

LABEX TULIP

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

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