Dissecting Disease-Suppressive Rhizosphere Microbiomes by Functional Amplicon Sequencing and 10× Metagenomics-Reference-Cited by-同舟云学术

Dissecting Disease-Suppressive Rhizosphere Microbiomes by Functional Amplicon Sequencing and 10× Metagenomics

Published:2021-06-29 Issue:3 Volume:6 Page:
ISSN:2379-5077
Container-title:mSystems
language:en
Short-container-title:mSystems

Author:

Tracanna Vittorio¹^ORCID,Ossowicki Adam²^ORCID,Petrus Marloes L. C.³^ORCID,Overduin Sam¹,Terlouw Barbara R.¹^ORCID,Lund George⁴,Robinson Serina L.⁵^ORCID,Warris Sven⁶^ORCID,Schijlen Elio G. W. M.⁶^ORCID,van Wezel Gilles P.²³^ORCID,Raaijmakers Jos M.²³^ORCID,Garbeva Paolina²^ORCID,Medema Marnix H.¹^ORCID

Affiliation:

1. Bioinformatics Group, Wageningen University and Research, Wageningen, The Netherlands

2. Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands

3. Microbial Biotechnology, Leiden Institute of Biology, Leiden, The Netherlands

4. Biointeractions and Crop Protection, Rothamsted Research, Harpenden, United Kingdom

5. BioTechnology Institute, University of Minnesota—Twin Cities, Falcon Heights, Minnesota, USA

6. Bioscience, Wageningen University and Research, Wageningen, The Netherlands

Abstract

Soil-borne plant-pathogenic fungi continue to be a major threat to agriculture and horticulture. The genus Fusarium in particular is one of the most devastating groups of soilborne fungal pathogens for a wide range of crops.

Funder

Nederlandse Organisatie voor Wetenschappelijk Onderzoek

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modeling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mSystems.01116-20

Reference65 articles.

1. Food and Agriculture Organization. 2020. FAOSTAT. http://faostat.fao.org/.

2. The Top 10 fungal pathogens in molecular plant pathology

3. Recent population changes of Fusarium head blight pathogens: drivers and implications

4. Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat

5. Suppressive Soils

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