A High-Throughput Method for Identifying Novel Genes That Influence Metabolic Pathways Reveals New Iron and Heme Regulation in Pseudomonas aeruginosa

Author:

Glanville David G.1,Mullineaux-Sanders Caroline2,Corcoran Christopher J.1,Burger Brian T.3,Imam Saheed3,Donohue Timothy J.34ORCID,Ulijasz Andrew T.1ORCID

Affiliation:

1. Department of Microbiology and Immunology, Loyola University Chicago, Maywood, Illinois, USA

2. MRC Centre for Molecular Bacteriology and Infection, Department of Medicine, Imperial College, London, United Kingdom

3. Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin, Madison, Wisconsin, USA

4. Department of Bacteriology, University of Wisconsin, Madison, Wisconsin, USA

Abstract

The ability to simultaneously and more directly correlate genes with metabolite levels on a global level would provide novel information for many biological platforms yet has thus far been challenging. Here, we describe a method to help address this problem, which we dub “Met-Seq” ( met abolite-coupled Tn seq uencing).

Funder

HHS | NIH | National Institute of Allergy and Infectious Diseases

U.S. Department of Energy

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

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