Metagenomics Reveals the Influence of Land Use and Rain on the Benthic Microbial Communities in a Tropical Urban Waterway

Author:

Saxena Gourvendu123,Mitra Suparna45,Marzinelli Ezequiel M.56,Xie Chao5,Wei Toh Jun5,Steinberg Peter D.56,Williams Rohan B. H.2,Kjelleberg Staffan5,Lauro Federico M.57,Swarup Sanjay1283

Affiliation:

1. Department of Biological Sciences, National University of Singapore, Singapore, Singapore

2. Singapore Centre for Environmental Life Sciences Engineering (SCELSE), National University of Singapore, Singapore, Singapore

3. Synthetic Biology for Clinical and Technological Innovation, National University of Singapore, Singapore, Singapore

4. Leeds Institute for Biomedical and Clinical Sciences, University of Leeds, Leeds, United Kingdom

5. Singapore Centre for Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, Singapore, Singapore

6. Centre for Marine Bio-Innovation, School of Biological, Earth and Environmental Sciences, The University of New South Wales, Sydney, Australia

7. Asian School of the Environment, Nanyang Technological University, Singapore, Singapore

8. NUS Environmental and Research Institute, National University of Singapore, Singapore, Singapore

Abstract

Unravelling the microbial metagenomes of urban waterway sediments suggest that well-managed urban waterways have the potential to support diverse sedimentary microbial communities, similar to those of undisturbed natural freshwaters. Despite the fact that these urban waterways are well managed, our study shows that environmental pressures from land use and rain perturbations play a role in shaping the structure and functions of microbial communities in these waterways. We propose that although pulsed disturbances, such as rain perturbations, influence microbial communities, press disturbances, including land usage history, have a long-term and stronger influence on microbial communities. Our study found that the functions of microbial communities were less affected by environmental factors than the structure of microbial communities was, indicating that core microbial functions largely remain conserved in challenging environments.

Funder

National Research Foundation Singapore

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

Reference47 articles.

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