Viral Metagenome-Based Precision Surveillance of Pig Population at Large Scale Reveals Viromic Signatures of Sample Types and Influence of Farming Management on Pig Virome

Author:

He Biao12ORCID,Gong Wenjie13ORCID,Yan Xiaomin1,Zhao Zihan1,Yang Ling’en1,Tan Zhizhou1,Xu Lin1,Zhu Aiwei1,Zhang Jianing1,Rao Jihong1,Yu Xinglong4,Jiang Jianfeng15,Lu Zongji5,Zhang Yifang6,Wu Jianmin7,Li Yong8,Shi Yuxiang9,Jiang Qing10,Chen Xiwen11,Tu Changchun12ORCID

Affiliation:

1. Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, Jilin Province, China

2. Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonosis, Yangzhou University, Yangzhou, Jiangsu Province, China

3. Zoonoses Institute, College of Veterinary Medicine, Jilin University, Changchun, Jilin Province, China

4. College of Veterinary Medicine, Hunan Agricultural University, Changsha, Hunan Province, China

5. College of Life Sciences and Engineering, Foshan University, Foshan, Guangdong Province, China

6. College of Veterinary Medicine, Yunnan Agricultural University, Kunming, Yunnan Province, China

7. Guangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi Zhuang Autonomous Region, China

8. College of Life Sciences, Ningxia University, Yinchuan, Ningxia Hui Autonomous Region, China

9. College of Life Sciences and Food Engineering, Hebei University of Engineering, Handan, Hebei Province, China

10. Center of Animal Disease Prevention and Control of Rongchang District, Rongchang, Chongqing Municipality, China

11. Animal Disease Prevention and Control & Healthy Breeding Engineering Technology Research Center, Mianyang Normal University, Mianyang, Sichuan Province, China

Abstract

Pigs are deeply involved in human lives; hence, their viruses are associated with public health. Here, we established the most comprehensive virome of healthy piglets to date, which provides a viromic baseline of weaned pigs for disease prevention and control, highlighting that longitudinal viromic monitoring is needed to better understand the dynamics of the virome in pig development and disease occurrence.

Funder

National Key Research and Development Program of China

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modeling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

Reference72 articles.

1. Ministry of Agriculture and Rural Affair of the People's Republic of China. 2016. National pig production and development plan (2016–2020). http://www.moa.gov.cn/nybgb/2016/diwuqi/201711/t20171127_5920859.htm.

2. United States Department of Agriculture. 2018. Statistics of cattle hogs and sheep. Agricultural Statistics 2018. https://downloads.usda.library.cornell.edu/usda-esmis/files/j3860694x/2z10wz00c/9019s972q/Ag_Stats_2018.pdf.

3. Statistics on introduction of breeding pigs in China, 2017;Sun D;Swine Industry Sci,2018

4. A Novel Porcine Circovirus Distantly Related to Known Circoviruses Is Associated with Porcine Dermatitis and Nephropathy Syndrome and Reproductive Failure

5. Detection and Genetic Characterization of Deltacoronavirus in Pigs, Ohio, USA, 2014

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3