Sequence Conservation of the Region Targeted by the Abbott RealTime HBV Viral Load Assay in Clinical Specimens

Author:

Cloherty Gavin A.1,Rhoads James1,Young Thomas P.2,Parkin Neil T.3,Holzmayer Vera4,Yuen Lilly5,Mullen Carolyn1

Affiliation:

1. Abbott Molecular, Des Plaines, Illinois, USA

2. University of California, San Francisco, San Francisco, California, USA

3. Data First Consulting, Belmont, California, USA

4. Abbott Diagnostics, Abbott Park, Illinois, USA

5. Evivar Medical Pty. Ltd., Melbourne, Victoria, Australia

Abstract

ABSTRACT The Abbott RealTime HBV assay targets the N-terminal region of the S gene. Here we analyzed the sequence variability of the assay target region from >2,100 clinical specimens. Thermodynamic modeling of the percentage of bound primer/probe at the assay annealing temperature was performed to assess the potential effect of sequence variability.

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

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