Multicenter Comparison of Different Real-Time PCR Assays for Quantitative Detection of Epstein-Barr Virus

Author:

Hayden R. T.1,Hokanson K. M.2,Pounds S. B.3,Bankowski M. J4,Belzer S. W.5,Carr J.1,Diorio D.6,Forman M. S.7,Joshi Y.8,Hillyard D.9,Hodinka R. L.8,Nikiforova M. N.6,Romain C. A.10,Stevenson J.11,Valsamakis A.7,Balfour H. H.2

Affiliation:

1. Departments of Pathology

2. University of Minnesota Medical Center, Minneapolis, Minnesota

3. Biostatistics, St. Jude Children's Research Hospital, Memphis, Tennessee

4. Department of Microbiology, Diagnostic Laboratory Services, Inc., and the Queens and Kuakini Health Systems, Honolulu, Hawaii

5. Viromed (LabCorp) Laboratories Minnetonka, Minnesota

6. Department of Pathology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio

7. Department of Pathology, Johns Hopkins Medicine, Baltimore, Maryland

8. Departments of Pediatrics and Pathology, Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania

9. University of Utah School of Medicine, Salt Lake City, Utah

10. University of Minnesota Medical Center, Fairview, Minneapolis, Minnesota

11. ARUP Institute for Clinical & Experimental Pathology, Salt Lake City, Utah

Abstract

ABSTRACT Quantification of Epstein-Barr virus (EBV) in peripheral blood is important for the diagnosis and management of serious EBV diseases, including posttransplant lymphoproliferative disorder. A variety of PCR-based methods are currently in use; however, there is little information on their comparability. This study assessed the relative performance of different quantitative assays. A multicenter comparative study was performed at eight sites using three panels consisting of serial dilutions of quantified EBV DNA and extracts from a total of 19 whole-blood specimens. Samples were distributed and tested blindly. Instrumentation, probe chemistries, amplification targets, and other test-related aspects varied considerably between laboratories. Each laboratory's calibration curve indicated strong evidence of a consistent log-linear relationship between viral load and cycle threshold, suggesting that intralaboratory tracking of a given patient would yield similar relative quantitative trends among the participating test sites. There was strong concordance among laboratories with respect to qualitative test results; however, marked quantitative discordance was seen. For most samples, the across-laboratory interquartile range of the reported viral load (in copies/μl) was roughly 0.6 log-units, and for one sample the overall range was approximately 4.2 log-units. While intralaboratory tracking of patients may yield similar results, these data indicate a need for caution when attempting to compare clinical results obtained at different institutions and suggest the potential value to be gained by more standardized testing methodology.

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

Reference18 articles.

1. Bakker, N. A., E. A. Verschuuren, M. E. Erasmus, B. G. Hepkema, N. J. Veeger, C. G. Kallenberg, and W. van der Bij. 2007. Epstein-Barr virus-DNA load monitoring late after lung transplantation: a surrogate marker of the degree of immunosuppression and a safe guide to reduce immunosuppression. Transplantation83:433-438.

2. Cohen, J. I. 2005. Clinical aspects of Epstein-Barr virus infection, p. 35-54. In E. Robertson (ed.), Epstein-Barr virus. Caister Academic Press, Norfolk, England.

3. Comparison of Various Blood Compartments and Reporting Units for the Detection and Quantification of Epstein-Barr Virus in Peripheral Blood

4. Hammer, S. M., M. S. Saag, M. Schechter, J. S. Montaner, R. T. Schooley, D. M. Jacobsen, M. A. Thompson, C. C. Carpenter, M. A. Fischl, B. G. Gazzard, J. M. Gatell, M. S. Hirsch, D. A. Katzenstein, D. D. Richman, S. Vella, P. G. Yeni, and P. A. Volberding. 2006. Treatment for adult HIV infection: 2006 recommendations of the International AIDS Society-USA panel. Top. HIV Med.14:827-843.

5. An international collaborative study to establish the 1st international standard for HIV-1 RNA for use in nucleic acid-based techniques

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3