Genome sequence of <i>Emydomyces testavorans</i> type strain 16-2883 (ATCC TSD-145), an onygenalean fungus associated with freshwater aquatic turtle shell lesions-Reference-Cited by-同舟云学术

Genome sequence of Emydomyces testavorans type strain 16-2883 (ATCC TSD-145), an onygenalean fungus associated with freshwater aquatic turtle shell lesions

Published:2023-09-19 Issue:9 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Hoyer Lois L.¹^ORCID,Hogan Elizabeth K.²,Adamovicz Laura³⁴,Allender Matthew C.³⁴⁵,Terio Karen A.⁶,Hernandez Alvaro G.²

Affiliation:

1. Department of Pathobiology, College of Veterinary Medicine, University of Illinois Urbana-Champaign , Urbana, Illinois, USA

2. Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign , Urbana, Illinois, USA

3. Wildlife Epidemiology Laboratory, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois Urbana-Champaign , Urbana, Illinois, USA

4. Veterinary Diagnostic Laboratory, College of Veterinary Medicine, University of Illinois Urbana-Champaign , Urbana, Illinois, USA

5. Chicago Zoological Society, Brookfield Zoo , Brookfield, Illinois, USA

6. Zoological Pathology Program, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois Urbana-Champaign , Brookfield, Illinois, USA

Abstract

ABSTRACT Emydomyces testavorans is an onygenalean keratinophilic fungus associated with shell and skin lesions in freshwater aquatic turtles. The genome sequence presented here includes five contigs (ranging in size from 2.8 to 9.8 Mb; 31.8 Mb total; 40% GC) and a 92.2-kb mitochondrial genome. The nuclear genome predicted 7,550 genes.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00222-23

Reference10 articles.

1. Shell Lesions Associated With Emydomyces testavorans Infection in Freshwater Aquatic Turtles

2. Emydomyces testavorans , a New Genus and Species of Onygenalean Fungus Isolated from Shell Lesions of Freshwater Aquatic Turtles

3. Hoyer LL . 2023. Extraction of yeast high-molecular-weight genomic DNA v1. Protocols.io. Available from: https://doi.org/10.17504/protocols.io.rm7vzb1b4vx1/v1.

4. Wick RR Menzel P . 2019. Filtlong. Available from: https://github.com/rrwick/Filtlong

5. Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm