Complete genome sequences of two avian pathogenic Escherichia coli strains isolated from broilers exhibiting colibacillosis in Mississippi

Author:

Jia Linan1,Arick II Mark A.2,Hsu Chuan-Yu2,Peterson Daniel G.2,Evans Jeffrey D.3,Robinson Kelsy3,Adhikari Pratima1,Zhang Li1ORCID

Affiliation:

1. Poultry Science, Mississippi State University, Starkville, Mississippi, USA

2. Institute for Genomics, Biocomputing and Biotechnology, Mississippi State University, Starkville, Mississippi, USA

3. Poultry Research Unit, USDA, Agriculture Research Service, Starkville, Mississippi, USA

Abstract

ABSTRACT We report the whole-genome sequences of Escherichia coli strains APEC-O2-MS1266 and APEC-O2-MS1657 isolated from the liver and heart of infected broilers in Mississippi State, US. The genomic information of these two causative strains may provide a valuable reference for comparative studies of avian pathogenic E. coli .

Funder

U.S. Department of Agriculture

MSU | Mississippi Agricultural and Forestry Experiment Station, Mississippi State University

Publisher

American Society for Microbiology

Reference15 articles.

1. Molecular characterization of avian pathogenic Escherichia coli from broiler chickens with colibacillosis

2. Colibacillosis

3. JiaL, Devkota P, Arick IIMA, HsuC-Y, PetersonDG, EvansJD. 2022. Complete genome sequence of six multidrug resistance avian pathogenic Escherichia coli strains isolated from broilers exhibiting colibacillosis, Abstr 349P. In Abstr Poult SCI Assoc Annu Mtg. Poultry Science Association, San Antonio, TX.

4. A highly specific Escherichia coli qPCR and its comparison with existing methods for environmental waters

5. Cutadapt removes adapter sequences from high-throughput sequencing reads

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