Systematic Analysis of Impact of Sampling Regions and Storage Methods on Fecal Gut Microbiome and Metabolome Profiles

Author:

Liang Yali1,Dong Tianyu23,Chen Minjian23,He Lianping4,Wang Tingzhang5,Liu Xingyin6ORCID,Chang Hang7,Mao Jian-Hua7ORCID,Hang Bo7,Snijders Antoine M.7,Xia Yankai23

Affiliation:

1. School of Public Health, Wannan Medical College, Wuhu, China

2. State Key Laboratory of Reproductive Medicine, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China

3. Key Laboratory of Modern Toxicology of Ministry of Education, School of Public Health, Nanjing Medical University, Nanjing, China

4. Department of Immunology, Nanjing Medical University, Nanjing, China

5. Zhejiang Institute of Microbiology, Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, China

6. Department of Pathogen Biology-Microbiology Division, Nanjing Medical University, Nanjing, China

7. Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA

Abstract

The gastrointestinal microbiome and metabolome can provide a new angle to understand the development of health and disease. Stool samples are most frequently used for large-scale cohort studies. Standardized procedures for stool sample handling and storage can be a determining factor for performing microbiome or metabolome studies. In this study, we focused on the effects of stool sampling regions and stool sample storage conditions on variations in the gut microbiome composition and metabolome profile.

Funder

State Key Lab of Reproductive Medicine of Nanjing Medical University

Qing Lan Projects of Jiangsu Province

Key Projects of Visiting Scholars at Home and Abroad

National Natural Science Foundation of China

Publisher

American Society for Microbiology

Subject

Molecular Biology,Microbiology

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