Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints-Reference-Cited by-同舟云学术

Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints

Published:2019-08-28 Issue:4 Volume:4 Page:
ISSN:2379-5042
Container-title:mSphere
language:en
Short-container-title:mSphere

Author:

Gomez Andres¹^ORCID,Sharma Ashok Kumar¹,Mallott Elizabeth K.²^ORCID,Petrzelkova Klara J.³⁴⁵,Jost Robinson Carolyn A.⁶,Yeoman Carl J.⁷,Carbonero Franck⁸,Pafco Barbora³⁹,Rothman Jessica M.¹⁰,Ulanov Alexander¹¹,Vlckova Klara³⁹,Amato Katherine R.²,Schnorr Stephanie L.¹²¹³^ORCID,Dominy Nathaniel J.¹⁴,Modry David⁴⁹¹⁵,Todd Angelique¹⁶,Torralba Manolito¹⁷,Nelson Karen E.¹⁷,Burns Michael B.¹⁸,Blekhman Ran¹⁹,Remis Melissa²⁰,Stumpf Rebecca M.²¹²²,Wilson Brenda A.²¹²³,Gaskins H. Rex²¹²⁴,Garber Paul A.²²,White Bryan A.²¹²⁴,Leigh Steven R.²⁵

Affiliation:

1. Department of Animal Science, University of Minnesota, Twin Cities, St. Paul, Minnesota, USA

2. Department of Anthropology, Northwestern University, Evanston, Illinois, USA

3. Institute of Vertebrate Biology, The Czech Academy of Sciences, Brno, Czech Republic

4. Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, Ceske Budejovice, Czech Republic

5. Liberec Zoo, Liberec, Czech Republic

6. Department of Anthropology, University of North Carolina, Wilmington, North Carolina, USA

7. Department of Animal and Range Sciences, Montana State University, Bozeman, Montana, USA

8. Department of Nutrition & Exercise Physiology, Elson S. Floyd College of Medicine, Washington State University, Spokane, Washington, USA

9. Department of Pathology and Parasitology, Faculty of Veterinary Medicine, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czech Republic

10. Department of Anthropology, Hunter College of CUNY and New York Consortium in Evolutionary Primatology (NYCEP), New York, New York, USA

11. Metabolomics Center, Roy J. Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA

12. Department of Anthropology, University of Nevada, Las Vegas, Nevada, USA

13. Konrad Lorenz Institute for Evolution and Cognition Research, Klosterneuburg, Austria

14. Department of Anthropology, Dartmouth College, Hanover, New Hampshire, USA

15. Central European Institute for Technology (CEITEC), University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czech Republic

16. World Wildlife Fund, Dzanga-Sangha Protected Areas, Bayanga, Central African Republic

17. J. Craig Venter Institute, La Jolla, California, USA

18. Department of Biology, Loyola University Chicago, Chicago, Illinois, USA

19. Department of Genetics, Cell Biology, and Development, University of Minnesota, Twin Cities, Minneapolis, Minnesota, USA

20. Department of Anthropology, Purdue University, West Lafayette, Indiana, USA

21. Carl Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA

22. Department of Anthropology, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA

23. Department of Microbiology, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA

24. Department of Animal Sciences, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA

25. Department of Anthropology, University of Colorado, Boulder, Colorado, USA

Abstract

The results of this study indicate a discordance between gut microbiome composition and evolutionary history in primates, calling into question previous notions about host genetic control of the primate gut microbiome. Microbiome similarities between humans consuming nonindustrialized diets and monkeys characterized by subsisting on eclectic, omnivorous diets also raise questions about the ecological and nutritional drivers shaping the human gut microbiome. Moreover, a more detailed understanding of the factors associated with gut microbiome plasticity in primates offers a framework to understand why humans following industrialized lifestyles have deviated from states thought to reflect human evolutionary history. The results also provide perspectives for developing therapeutic dietary manipulations that can reset configurations of the gut microbiome to potentially improve human health.

Publisher

American Society for Microbiology

Subject

Molecular Biology,Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mSphere.00271-19

Reference58 articles.

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