Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam-Reference-Cited by-同舟云学术

Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam

Published:2021-11-04 Issue:44 Volume:10 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Do Thi-Xuan¹^ORCID,Huynh Van-Phuc²,Le Lan-Anh²,Nguyen Thuy-Vy³^ORCID,Nguyen-Pham Anh-Thi¹,Bui-Thi Minh-Dieu¹,Chau-Thi Anh-Thy⁴,Tran Sy-Nam⁵^ORCID,Nguyen Van-Thanh¹,Ho-Huynh Thuy-Duong²³^ORCID

Affiliation:

1. Biotechnology Research and Development Institute, Can Tho University, Can Tho, Vietnam

2. KTEST Science Company, Ho Chi Minh City, Vietnam

3. Department of Genetics, Faculty of Biology and Biotechnology, University of Science, VNU-HCM, Ho Chi Minh City, Vietnam

4. Faculty of Agriculture, Can Tho University, Can Tho, Vietnam

5. College of Environment and Natural Resources, Can Tho University, Can Tho, Vietnam

Abstract

Different rice farming systems affect the soil microbial communities. Here, we report the results of 16S rRNA gene amplicon sequencing of soils collected from intensive rice cultivation and rice-shrimp farming systems in Soc Trang, Vietnam. The dominant phyla in these systems were Firmicutes , Actinobacteriota , Chloroflexi , Myxococcota , and Acidobacteriota .

Funder

JICA

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00595-21

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