Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines-Reference-Cited by-同舟云学术

Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines

Published:2021-07-15 Issue:28 Volume:10 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Velasco John Mark¹²^ORCID,Chinnawirotpisan Piyawan¹^ORCID,Valderama Maria Theresa¹,Joonlasak Khajohn¹,Manasatienkij Wudtichai¹,Huang Angkana¹,Diones Paula Corazon¹,Navarro Fatima Claire³,Vila Vicente³,Tabinas Henry³,Chua Domingo³,Fernandez Stefan¹,Jones Anthony¹,Klungthong Chonticha¹

Affiliation:

1. U.S. Army Medical Directorate—Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand

2. University of the Philippines Manila, Ermita, Manila, Philippines

3. V. Luna Medical Center, Armed Forces of the Philippines Health Service Command, Quezon City, Philippines

Abstract

Here, we report the complete genome sequences of 11 SARS-CoV-2 variants from the Philippines. Lineage analysis showed 3 B.1.1.7 and 8 B.1.351 sequences. One B.1.1.7 sequence contained two additional mutations, F318N and V320F, with V320F located in the receptor-binding domain of the S1 subunit.

Funder

DOD | MHS | Armed Forces Health Surveillance Branch

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00498-21

Reference24 articles.

1. A Novel Coronavirus from Patients with Pneumonia in China, 2019

2. Philippine Genome Center. 2021. PGC SARS-CoV-2 bulletin no. 6: first case of the new variant under lineage B.1.1.7 detected in the Philippines. https://pgc.up.edu.ph/pgc-sars-cov-2-bulletin-no-6/.

3. DOH. 2021. Philippine genomic biosurveillance detects SARS-CoV-2 UK variant. https://doh.gov.ph/doh-press-release/PH-GENOMIC-BIOSURVEILLANCE-DETECTS-SARS-COV-2-UK-VARIANT.

4. DOH. 2021. Sustained biosurveillance efforts detect 6 B.1.351 cases 30 B.1.1.7 cases and 2 cases with mutations of interest. https://doh.gov.ph/doh-press-release/SUSTAINED-BIOSURVEILLANCE-EFFORTS-DETECT-6-B-1-351-CASES-30-B-1-1-7-CASES-AND-2-CASES-WITH-MUTATIONS-OF-INTEREST.

5. DOH. 2021. Continuing biosurveillance detects additional B.1.1.7 and B.1.351 cases and P.1. variant case. https://doh.gov.ph/doh-press-release/CONTINUING-BIOSURVEILLANCE-DETECTS-ADDITIONAL-B-1-1-7-AND-B-1-351-CASES-AND-P-1-VARIANT-CASE.

Cited by 6 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Comparative Atlas of SARS-CoV-2 Substitution Mutations: A Focus on Iranian Strains Amidst Global Trends;Viruses;2024-08-20

2. Genomic surveillance of genes encoding the SARS-CoV-2 spike protein to monitor for emerging variants on Jeju Island, Republic of Korea;Frontiers in Microbiology;2023-07-18

3. Simultaneous detection of omicron and other SARS-CoV-2 variants by multiplex PCR MassARRAY technology;Scientific Reports;2023-02-06

4. Simultaneous Detection of Omicron and Other SARS-CoV-2 Variants by Multiplex PCR MassARRAY Technology;2023-01-17

5. Clinical characterization of COVID-19 breakthrough infections, Philippines;Journal of Clinical Virology;2022-06