Draft Genome Sequences of 142 Mycobacterium avium subsp. paratuberculosis Strains Isolated from Naturally Infected Dairy Cattle-Reference-Cited by-同舟云学术

Draft Genome Sequences of 142 Mycobacterium avium subsp. paratuberculosis Strains Isolated from Naturally Infected Dairy Cattle

Published:2021-09-23 Issue:38 Volume:10 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Conde Cyril¹,Branger Maxime¹,Cochard Thierry¹,Rossignol Marie-Noëlle²,Fourichon Christine³,Delafosse Arnaud⁴,Davergne Aurore⁵,Joly Alain⁶,Ngwa-Mbot David⁷,Journaux Laurent⁸,Guatteo Raphael³,Schibler Laurent⁹,Biet Franck¹^ORCID

Affiliation:

1. INRAE, Université de Tours, ISP, Nouzilly, France

2. INRAE, GABI, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France

3. INRAE, UMR1300 Biologie, Epidémiologie et Analyse de Risque en Santé Animale; Centre Nantes-Angers, Nantes, France

4. Groupement de Défense Sanitaire Orne, Alençon, France

5. GDMA, Bois-Guillaume, France

6. Groupement de Défense Sanitaire Bretagne, Vannes, France

7. GDS France, Paris, France

8. Idele, Paris, France

9. Allice, Paris, France

Abstract

Mycobacterium avium subsp. paratuberculosis is the etiological agent of Johne’s disease in ruminants. Here, we report the annotated draft genome sequences of 142 M. avium subsp. paratuberculosis strains that were isolated from dairy cattle in France between 2014 and 2018. The genomes of these strains were sequenced using Illumina technology.

Funder

APIS-GENE

Institut National de la Recherche Agronomique

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00697-21

Reference12 articles.

1. Pathogenesis, Molecular Genetics, and Genomics of Mycobacterium avium subsp. paratuberculosis, the Etiologic Agent of Johne’s Disease

2. Genetic Diversity Among Mycobacterium avium Subspecies Revealed by Analysis of Complete Genome Sequences

3. Longitudinal study of Mycobacterium avium ssp. paratuberculosis fecal shedding patterns and concurrent serological patterns in naturally infected dairy cattle

4. New Variable-Number Tandem-Repeat Markers for Typing Mycobacterium avium subsp. paratuberculosis and M. avium Strains: Comparison with IS 900 and IS 1245 Restriction Fragment Length Polymorphism Typing

5. fastp: an ultra-fast all-in-one FASTQ preprocessor

Cited by 3 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Genomic epidemiology of Mycobacterium avium subsp. paratuberculosis isolates from Canadian dairy herds provides evidence for multiple infection events;Frontiers in Genetics;2023-02-02

2. Genetic Features of Mycobacterium avium subsp. paratuberculosis Strains Circulating in the West of France Deciphered by Whole-Genome Sequencing;Microbiology Spectrum;2022-12-21

3. Mycobacterium avium subsp. paratuberculosis Infected Cows Reveal Divergent Immune Response in Bovine Peripheral Blood Derived Lymphocyte Proteome;Metabolites;2022-09-29