Network Models from Petri Nets with Catalysts

Author:

Baez John C.12,Foley John3,Moeller Joe1

Affiliation:

1. Department of Mathematics, University of California, Riverside CA, 92521, USA

2. Centre for Quantum Technologies, National University of Singapore, 117543, Singapore

3. Metron, Inc., 1818 Library St., Suite 600, Reston, VA 20190, USA

Abstract

Petri networks and network models are two frameworks for the compositional design of systems of interacting entities. Here we show how to combine them using the concept of a `catalyst': an entity that is neither destroyed nor created by any process it engages in. In a Petri net, a place is a catalyst if its in-degree equals its out-degree for every transition. We show how a Petri net with a chosen set of catalysts gives a network model. This network model maps any list of catalysts from the chosen set to the category whose morphisms are all the processes enabled by this list of catalysts. Applying the Grothendieck construction, we obtain a category fibered over the category whose objects are lists of catalysts. This category has as morphisms all processes enabled by some list of catalysts. While this category has a symmetric monoidal structure that describes doing processes in parallel, its fibers also have premonoidal structures that describe doing one process and then another while reusing the catalysts.

Publisher

Compositionality

Subject

General Medicine

Cited by 4 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Optics for Premonoidal Categories;Electronic Proceedings in Theoretical Computer Science;2023-12-14

2. On the Pre- and Promonoidal Structure of Spacetime;Electronic Proceedings in Theoretical Computer Science;2023-08-07

3. Operads for complex system design specification, analysis and synthesis;Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences;2021-06

4. Nets with Mana: A Framework for Chemical Reaction Modelling;Graph Transformation;2021

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