Unlocking a new hydrogen-bonding marker: C–O bond shortening in vicinal diols revealed by rotational spectroscopy

Author:

Ma Jiarui1ORCID,Insausti Aran123ORCID,Al-Jabiri Mohamad H.1ORCID,Carlson Colton D.1ORCID,Jäger Wolfgang1ORCID,Xu Yunjie1ORCID

Affiliation:

1. Department of Chemistry, University of Alberta 1 , Edmonton, Alberta T6G 2G2, Canada

2. Departamento de Química Física, Universidad del País Vasco (UPV/EHU) Barrio Sarriena s/n 2 , Leioa, Spain

3. Instituto Biofisika (UPV/EHU, CSIC) Barrio Sarriena s/n 3 , Leioa, Spain

Abstract

The conformational space of cis-1,2-cyclohexanediol, a model molecule for cyclic vicinal diols, was investigated using rotational spectroscopy and density functional theory calculations. Four low energy conformers within an energy window of 5 kJ mol−1 were identified computationally. A rotational spectrum of jet-cooled cis-1,2-cyclohexanediol was recorded with a chirped pulse Fourier transform microwave spectrometer. Two sets of rotational transitions were observed and could be assigned to conformers of cis-1,2-cyclohexanediol. The non-observation of other low energy conformers was explained by conformational conversion barrier height calculations and results from experimental spectra recorded with different carrier gases. Eight isotopologues, including those with 13C and 18O, of the lowest energy conformer were observed, allowing the determination of the semi-experimental equilibrium structure, reSE. Interestingly, the structural analysis revealed that the C–O bond length of the intramolecular hydrogen-bond donor is shorter than that of the acceptor. This appears to be a general characteristic of vicinal diols and can be used as a novel hydrogen-bond marker in such compounds.

Funder

Natural Sciences and Engineering Research Council of Canada

Canada Research Chairs

University of Alberta

Digital Research Alliance of Canada

Publisher

AIP Publishing

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