The mechanism of RNA base fraying: Molecular dynamics simulations analyzed with core-set Markov state models-Reference-Cited by-同舟云学术

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The mechanism of RNA base fraying: Molecular dynamics simulations analyzed with core-set Markov state models

Published:2019-04-21 Issue:15 Volume:150 Page:154123
ISSN:0021-9606
Container-title:The Journal of Chemical Physics
language:en
Short-container-title:J. Chem. Phys.

Author:

Pinamonti Giovanni¹,Paul Fabian²,Noé Frank¹^ORCID,Rodriguez Alex³^ORCID,Bussi Giovanni⁴^ORCID

Affiliation:

1. Department for Mathematics and Computer Science, Freie Universität, Berlin, Germany

2. Department of Biochemistry and Molecular Biology, Gordon Center for Integrative Science, The University of Chicago, Chicago, Illinois 60637, USA

3. ICTP, International Centre for Theoretical Physics, Trieste, Italy

4. Scuola Internazionale Superiore di Studi Avanzati, via Bonomea 265, Trieste, Italy

Funder

Deutsche Forschungsgemeinschaft

H2020 European Research Council

FP7 Ideas: European Research Council

Publisher

AIP Publishing

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

Link

http://aip.scitation.org/doi/pdf/10.1063/1.5083227

Reference87 articles.

1. The rise of regulatory RNA

2. RNA dynamics: it is about time

3. Anton 2: Raising the Bar for Performance and Programmability in a Special-Purpose Molecular Dynamics Supercomputer

4. Enhancing Important Fluctuations: Rare Events and Metadynamics from a Conceptual Viewpoint

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