Derivation of a Markov state model of the dynamics of a protein-like chain immersed in an implicit solvent-Reference-Cited by-同舟云学术

Derivation of a Markov state model of the dynamics of a protein-like chain immersed in an implicit solvent

Published:2014-09-07 Issue:9 Volume:141 Page:095101
ISSN:0021-9606
Container-title:The Journal of Chemical Physics
language:en
Short-container-title:The Journal of Chemical Physics

Author:

Schofield Jeremy¹,Bayat Hanif¹

Affiliation:

1. Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada

Funder

Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada (NSERC Canadian Network for Research and Innovation in Machining Technology)

Publisher

AIP Publishing

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

Link

http://aip.scitation.org/doi/pdf/10.1063/1.4894436

Reference48 articles.

1. Hierarchical analysis of conformational dynamics in biomolecules: Transition networks of metastable states

2. Coarse Master Equations for Peptide Folding Dynamics

3. Statistical clustering techniques for the analysis of long molecular dynamics trajectories: analysis of 2.2-ns trajectories of YPGDV

4. Optimal use of data in parallel tempering simulations for the construction of discrete-state Markov models of biomolecular dynamics

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