Toward an extreme-scale electronic structure system

Author:

Galvez Vallejo Jorge L.1ORCID,Snowdon Calum1,Stocks Ryan1ORCID,Kazemian Fazeleh1,Yan Yu Fiona Chuo1ORCID,Seidl Christopher1,Seeger Zoe2ORCID,Alkan Melisa3ORCID,Poole David4ORCID,Westheimer Bryce M.3ORCID,Basha Mehaboob5,De La Pierre Marco5ORCID,Rendell Alistair6,Izgorodina Ekaterina I.2ORCID,Gordon Mark S.7ORCID,Barca Giuseppe M. J.1ORCID

Affiliation:

1. School of Computing, Australian National University 1 , Canberra 2601, ACT, Australia

2. School of Chemistry, Monash University 2 , Clayton 3800, VIC, Australia

3. Department of Chemistry, Iowa State University 3 , Ames, Iowa 50011-3111, USA

4. School of Chemistry and Biochemistry, Georgia Institute of Technology 4 , Atlanta, Georgia 30332, USA

5. Pawsey Supercomputing Research Centre 5 , Kensington, WA 6151, Australia

6. College of Science and Engineering, Flinders University 6 , Adelaide, SA 5042, Australia

7. Ames Laboratory 7 , Ames, Iowa 50011, USA

Abstract

Electronic structure calculations have the potential to predict key matter transformations for applications of strategic technological importance, from drug discovery to material science and catalysis. However, a predictive physicochemical characterization of these processes often requires accurate quantum chemical modeling of complex molecular systems with hundreds to thousands of atoms. Due to the computationally demanding nature of electronic structure calculations and the complexity of modern high-performance computing hardware, quantum chemistry software has historically failed to operate at such large molecular scales with accuracy and speed that are useful in practice. In this paper, novel algorithms and software are presented that enable extreme-scale quantum chemistry capabilities with particular emphasis on exascale calculations. This includes the development and application of the multi-Graphics Processing Unit (GPU) library LibCChem 2.0 as part of the General Atomic and Molecular Electronic Structure System package and of the standalone Extreme-scale Electronic Structure System (EXESS), designed from the ground up for scaling on thousands of GPUs to perform high-performance accurate quantum chemistry calculations at unprecedented speed and molecular scales. Among various results, we report that the EXESS implementation enables Hartree–Fock/cc-pVDZ plus RI-MP2/cc-pVDZ/cc-pVDZ-RIFIT calculations on an ionic liquid system with 623 016 electrons and 146 592 atoms in less than 45 min using 27 600 GPUs on the Summit supercomputer with a 94.6% parallel efficiency.

Funder

U.S. Department of Energy

Commonwealth Scientific and Industrial Research Organisation

Publisher

AIP Publishing

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

Reference135 articles.

1. Quantisierung als eigenwertproblem;Ann. Phys.,1926

2. Molecular integrals over Gaussian basis functions;Sabin,1994

3. Two-electron integrals over Gaussian geminals;J. Chem. Theory Comput.,2016

4. Three- and four-electron integrals involving Gaussian geminals: Fundamental integrals, upper bounds, and recurrence relations;J. Chem. Phys.,2017

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Special Topic on High Performance Computing in Chemical Physics;The Journal of Chemical Physics;2023-12-01

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3