Examining the limits of time reweighting and Kramers’ rate theory to obtain correct kinetics from accelerated molecular dynamics
Author:
Publisher
AIP Publishing
Subject
Physical and Theoretical Chemistry,General Physics and Astronomy
Link
http://aip.scitation.org/doi/pdf/10.1063/1.3432761
Reference28 articles.
1. Long-timescale simulation methods
2. Nonphysical sampling distributions in Monte Carlo free-energy estimation: Umbrella sampling
3. Local elevation: A method for improving the searching properties of molecular dynamics simulation
4. Metadynamics: a method to simulate rare events and reconstruct the free energy in biophysics, chemistry and material science
5. Predicting slow structural transitions in macromolecular systems: Conformational flooding
Cited by 31 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Mechanism of Ligand Binding to Theophylline RNA Aptamer;Journal of Chemical Information and Modeling;2024-01-16
2. Equilibration of a Molecular Biological System Simulation;Computer Simulations in Molecular Biology;2023
3. Random walks in a free energy landscape combining augmented molecular dynamics simulations with a dynamic graph neural network model;Journal of Molecular Graphics and Modelling;2022-07
4. Going Beyond the d‐Band Center to Describe CO 2 Activation on Single‐Atom Alloys;Advanced Energy and Sustainability Research;2021-11-23
5. Accelerated Molecular Dynamics Methods for Long-Time Simulations in Materials;Computational Materials, Chemistry, and Biochemistry: From Bold Initiatives to the Last Mile;2021
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3