Computational single-objective scanning light sheet (cSOLS)

Author:

Xu Tienan12,Lin Hanqi12,Lim Yean J.12ORCID,Nicovich Philip R.3,Gaus Katharina4,Lee Woei Ming12ORCID

Affiliation:

1. Division of Genomic Sciences and Cancer, The John Curtin School of Medical Research, College of Health and Medicine, The Australian National University, Canberra, ACT 2601, Australia

2. ACRF INCITe Centre – ANU Node, The John Curtin School of Medical Research, The Australian National University, Canberra, ACT 2601, Australia

3. Cajal Neuroscience, 1616 Eastlake Ave. E, Seattle, Washington 98102, USA

4. EMBL Australia Node in Single Molecule Science, School of Medical Sciences, University of New South Wales, Sydney, Australia

Abstract

Single-objective scanning light sheet (SOLS) imaging has fueled major advances in volumetric bioimaging because it supports low phototoxic, high-resolution imaging over an extended period. The remote imaging unit in the SOLS does not use a conventional epifluorescence image detection scheme (a single tube lens). In this paper, we propose a technique called the computational SOLS (cSOLS) that achieves light sheet imaging without the remote imaging unit. Using a single microlens array after the tube lens (lightfield imaging), the cSOLS is immediately compatible with conventional epifluorescence detection. The core of cSOLS is a Fast Optical Ray (FOR) model. FOR generates 3D imaging volume (40 × 40 × 14 µm3) using 2D lightfield images taken under SOLS illumination within 0.5 s on a standard central processing unit (CPU) without multicore parallel processing. In comparison with traditional lightfield retrieval approaches, FOR reassigns fluorescence photons and removes out-of-focus light to improve optical sectioning by a factor of 2, thereby achieving a spatial resolution of 1.59 × 1.92 × 1.39 µm3. cSOLS with FOR can be tuned over a range of oblique illumination angles and directions and, therefore, paves the way for next-generation SOLS imaging. cSOLS marks an important and exciting development of SOLS imaging with computational imaging capabilities.

Funder

Australian Research Council

Publisher

AIP Publishing

Subject

Computer Networks and Communications,Atomic and Molecular Physics, and Optics

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