Mechanism of proton-coupled electron transfer described with QM/MM implementation of coupled-perturbed density-functional tight-binding

Author:

Maag Denis1ORCID,Böser Josua1ORCID,Witek Henryk A.23ORCID,Hourahine Ben4ORCID,Elstner Marcus15ORCID,Kubař Tomáš1ORCID

Affiliation:

1. Institute of Physical Chemistry, Karlsruhe Institute of Technology 1 , 76131 Karlsruhe, Germany

2. Department of Applied Chemistry and Institute of Molecular Science, National Yang Ming Chiao Tung University 2 , Hsinchu, Taiwan

3. Center for Emergent Functional Matter Science, National Yang Ming Chiao Tung University 3 , Hsinchu, Taiwan

4. Department of Physics, University of Strathclyde 4 , Glasgow G4 0NG, United Kingdom

5. Institute of Biological Interfaces (IBG-2), Karlsruhe Institute of Technology 5 , 76131 Karlsruhe, Germany

Abstract

Coupled-perturbed equations for degenerate orbitals were implemented for third order density-functional tight binding, which allowed the use of Mulliken charges as reaction coordinates. The method was applied to proton-coupled electron transfer (PCET) reactions in a model system and thoroughly tested for QM and QM/MM setups (i.e., coupled quantum and molecular mechanics). The performed enhanced sampling simulations were stable, and the obtained potentials of the mean force were able to address the thermodynamic and kinetic features of the reactions by showing the expected topography and energy barriers. Hence, this method has the potential to distinguish between concerted and sequential mechanisms and could next be applied to proton-coupled electron transfer reactions in more complex systems like proteins.

Funder

Deutsche Forschungsgemeinschaft

Ministerium für Wissenschaft, Forschung und Kunst Baden-Württemberg

National Science and Technology Council, Taiwan

Center for Emergent Functional Matter Science of National Yang Ming Chiao Tung University

Publisher

AIP Publishing

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Modern semiempirical electronic structure methods;The Journal of Chemical Physics;2024-01-24

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