Development of Screening Assays for Pathogen Virulence and Resistance to Phytophthora Root Rot and Wilting Complex in Raspberry

Author:

Sapkota Sanjib12,Burlakoti Rishi R.1ORCID,Dossett Michael3,Punja Zamir K.2

Affiliation:

1. Science and Technology Branch, Agassiz Research and Development Center, Agriculture and Agri-Food Canada, Agassiz, British Columbia V0M 1A0, Canada

2. Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada

3. BC Berry Cultivar Development Inc., c/o Agassiz Research and Development Centre, Agassiz, British Columbia V0M 1A0, Canada

Abstract

Phytophthora root rot and wilting complex (PRRW) of red raspberry, caused primarily by Phytophthora rubi, is an economically important disease in British Columbia (BC) and in raspberry producing regions globally. Reliable, rapid, and efficient screening methods are lacking for evaluating germplasm for potential disease resistance in raspberry breeding programs as well as for screening pathogen isolates for virulence. The objective of this study was to compare various screening methods for efficiency and rapidity in inducing symptoms of disease to identify the most suitable approach. We compared several intact plant root inoculation (IPRI) assays, detached stem assays, and an intact plant stem inoculation (IPSI) assay. A virulent isolate of P. rubi was inoculated in two commercial cultivars: ‘Chemainus’ (susceptible to PRRW) and ‘Cascade Bounty’ (moderately resistant to PRRW). For IPRI assays, days to first symptom development, plant wilt progression, and root assessment were recorded. For detached stem tissue and IPSI assays, days to first visible lesions and lesion size were assessed. Experiments were arranged in a completely randomized design with three replications in each experiment. Three IPRI assays produced reliable symptoms in both cultivars. Among the detached stem assays, a node inoculation method performed better than other methods. Detached stem assays are useful for rapid pathogenicity testing of P. rubi, whereas IPRI assays are better for screening germplasm for disease resistance. Overall, this study identified several assays that can be used for conducting studies on pathogen phenotypic diversity (pathogenicity and virulence tests) and screening raspberry cultivars, germplasm, and breeding materials for response to PRRW.

Funder

Canadian Agricultural Partnership (CAP) AgriScience Program

Raspberry Industry Development Council

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science

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