The First Complete Genome Resource for the Plant Pathogenic Fungus Exobasidium rhododendri

Author:

Li Yaoyao1,Liu Fei1,Wang Qi Ming234

Affiliation:

1. Hebei University, 56667, School of Life Sciences, Institute of Life Sciences and Green Development, Baoding, Hebei, China;

2. Hebei University, 56667, School of Life Sciences, Institute of Life Sciences and Green Development, Baoding, Hebei, China

3. Hebei University, 56667, Engineering Laboratory of Microbial Breeding and Preservation of Hebei Province, Baoding, Hebei, China

4. Hebei University, 56667, Key Laboratory of Microbial Diversity Research and Application of Hebei Province, Baoding, Hebei, China;

Abstract

Exobasidium rhododendri is a parasite of Rhododendron and also infects apples. A chromosome-level genome of E. rhododendri was assembled using the PacBio and Illumina datasets. The complete genome length is 17.6 Mb with N50 of 5.45 Mb, and its GC content is 50.08%. The assembly obtained contains four scaffolds including three nuclear chromosomes and one mitochondrion. A total of 6982 predicted protein-encoding genes containing 406 fungal secretion proteins and 249 candidate effectors in the E. rhododendri genome. This high-quality genome will help understand the pathogenic mechanism of this fungus.

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3