Climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics

Author:

Lagergren John1,Cashman Mikaela1,Melesse Vergara Veronica23,Eller Paul4,Gazolla Joao Gabriel Felipe Machado1,Chhetri Hari1,Streich Jared1,Climer Sharlee5,Thornton Peter6,Joubert Wayne4,Jacobson Daniel1

Affiliation:

1. Oak Ridge National Laboratory, Biosciences Division, Oak Ridge, Tennessee, United States;

2. Oak Ridge National Laboratory, National Center for Computational Sciences, Oak Ridge, Tennessee, United States

3. The University of Tennessee Knoxville, Bredesen Center for Interdisciplinary Research and Graduate Education, Knoxville, Tennessee, United States;

4. Oak Ridge National Laboratory, National Center for Computational Sciences, Oak Ridge, Tennessee, United States;

5. University of Missouri at Saint Louis, Department of Computer Science, St Louis, Missouri, United States;

6. Oak Ridge National Laboratory, Environmental Sciences Division, Oak Ridge, Tennessee, United States;

Abstract

Predicted growth in world population will put unparalleled stress on the need for sustainable energy and global food production, as well as increase the likelihood of future pandemics. In this work, we identify high-resolution environmental zones in the context of a changing climate and predict longitudinal processes relevant to these challenges. We do this using exhaustive vector comparison methods that measure the climatic similarity between all locations on earth at high geospatial resolution relative to global-scale analyses. The results are captured as networks, in which edges between geolocations are defined if their historical climate similarities exceed a threshold. We apply Markov clustering and our novel Correlation of Correlations method to the resulting climatic networks, which provides unprecedented agglomerative and longitudinal views of climatic relationships across the globe. The methods performed here resulted in the fastest (9.37x10^18 operations/sec) and one of the largest (168.7x10^21 operations) scientific computations ever performed, with more than 100 quadrillion edges considered for a single climatic network. Our climatic analysis reveals areas of the world experiencing rapid environmental changes, which can have important implications for global carbon fluxes and zoonotic spillover events. Correlation and network analyses of this kind are widely applicable across computational and predictive biology domains, including systems biology, ecology, carbon cycles, biogeochemistry, and zoonosis research.

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science,Molecular Biology,Ecology,Ecology, Evolution, Behavior and Systematics

Cited by 5 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Frontier: Exploring Exascale;Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis;2023-11-11

2. Experiences readying applications for Exascale;Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis;2023-11-11

3. Data-Driven Whole-Genome Clustering to Detect Geospatial, Temporal, and Functional Trends in SARS-CoV-2 Evolution;Proceedings of the Platform for Advanced Scientific Computing Conference;2023-06-26

4. Longitudinal Effects on Plant Species Involved in Agriculture and Pandemic Emergence Undergoing Changes in Abiotic Stress;Proceedings of the Platform for Advanced Scientific Computing Conference;2023-06-26

5. Ready for the Frontier: Preparing Applications for the World’s First Exascale System;Lecture Notes in Computer Science;2023

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