Frontiers and opportunities in bioenergy crop microbiome research networks

Author:

Howe Adina12,Bonito Gregory34,Chou Ming-Yi34,Cregger Melissa567,Fedders Anna89,Field John L.107,Martin Hector Garcia119,Labbe Jesse107,Mechan Marco124,Northen Trent1314,Shade Ashley154,Tschaplinski Timothy167

Affiliation:

1. Iowa State University of Science and Technology, 1177, Agricultural and Biosystems Engineering, Ames, Iowa, United States

2. Center for Advanced Bioenergy and Bioproducts Innovation, Iowa State University, Ames, Iowa, United States;

3. Michigan State University, 3078, East Lansing, Michigan, United States

4. Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, Michigan, United States;

5. Oak Ridge National Laboratory, 6146, Biosciences Division, Oak Ridge, Tennessee, United States

6. University of Tennessee, 4285, Ecology and Evolutionary Biology, Knoxville, Tennessee, United States

7. US Department of Energy Center for Bioenergy Innovation, 552230, Oak Ridge, Tennessee, United States;

8. University of Illinois at Urbana-Champaign, 14589, Urbana, Illinois, United States

9. Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana-Champaign, Illinois, United States;

10. Oak Ridge National Laboratory, 6146, Biosciences, Oak Ridge, Tennessee, United States

11. Lawrence Berkeley National Laboratory, 1666, Berkeley, California, United States

12. Michigan State University, 3078, Microbiology and Molecular Genetics, East Lansing, Michigan, United States

13. DOE Joint Genome Institute, 118576, Berkeley, California, United States

14. Joint BioEnergy Institute, 124489, Berkeley, California, United States;

15. Michigan State University, 3078, Department of Microbiology and Molecular Genetics, East Lansing, Michigan, United States,

16. Oak Ridge National Laboratory, 6146, Oak Ridge, Tennessee, United States

Abstract

Researchers from across the four U.S. Department of Energy Bioenergy Research Centers engaged in a microbiome workshop that focused on identifying challenges and collaboration opportunities to better understand bioenergy-relevant plant–microbe interactions. The virtual workshop included hands-on educational sessions and a keynote address on current best practices in microbiome science and community microbiome standards, as well as breakout sessions aimed at identifying microbiome-related data and measurements that should be prioritized, opportunities for and barriers to integrating plant metabolites to microbiome research, and strategies for more effectively integrating microbiome data and processes into existing models. Based on participant discussion, key findings of the workshop were the need to prioritize scaling data sharing across BRCs and the broader research community and securing collaborative infrastructure in the areas of microbiome-ecosystem modeling and molecular plant-microbe interactions. This workshop review highlights additional main findings from this event, to encourage cross-site and more holistic meta-analyses while promoting wide scientific community engagement across plant microbiome sciences.

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science,Molecular Biology,Ecology,Ecology, Evolution, Behavior and Systematics

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