Soil Type and Associated Microbiome Influence Chitin's Growth Promotion Effect in Lettuce

Author:

Kaufmann Moritz12ORCID,Li Leilei34ORCID,Van Poucke Christof5ORCID,Rhyner Nicola1,De Tender Caroline6ORCID,Uyttendaele Mieke3ORCID,Heyndrickx Marc57ORCID,Zipfel Cyril28ORCID,Pothier Joël F.1ORCID,Cottyn Bart4ORCID

Affiliation:

1. Environmental Genomics and Systems Biology Research Group, Institute of Natural Resource Sciences, Zurich University of Applied Sciences, Wädenswil, Switzerland

2. Department of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland

3. Department of Food Technology, Safety and Health, Ghent University, Ghent, Belgium

4. Plant Sciences Unit, Flanders Research Institute for Agriculture, Fisheries and Food (ILVO), Merelbeke, Belgium

5. Technology and Food Science Unit, ILVO, Melle, Belgium

6. Department of Biochemistry and Microbiology, Ghent University, Ghent, Belgium

7. Department of Pathobiology, Pharmacology and Zoological Medicine, Ghent University, Merelbeke, Belgium

8. The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, U.K.

Abstract

Chitin amendment of peat substrate has been proven effective in promoting lettuce growth and increasing phenolic compounds in lettuce seedlings. However, the effect of chitin soil amendment on lettuce growth in mineral soil remains unexplored. The effect of chitin amendment of mineral soil on lettuce growth and metabolite changes was investigated for the first time in the present study in comparison with chitin-amended peat substrate. Our findings showed that chitin addition in peat substrate increased lettuce head weight by approximately 50% at harvest, whereas this increase was 30% when chitin was added to mineral soil. Targeted metabolomics analysis indicated that chitin addition affected the phenolic compounds in lettuce seedlings, but this effect varied between soil types. Moreover, untargeted metabolomics analysis suggested that using peat substrate or mineral soil had a greater influence on produced lettuce metabolites than chitin addition. Rhizobiome analysis showed that specifically Mortierellaceae family members, known for chitin degradation and plant growth promotion, significantly increased in peat substrate upon chitin treatment. In mineral soil, three bacterial genera and five fungi, including known plant-growth-promoting genera, were significantly more abundant upon chitin treatment but Mortierellaceae family members were not. We assume that the observed effects primarily stem from soil characteristics and from chitin-induced alterations in rhizobiome composition, particularly the presence of Mortierellaceae members, leading to promoted lettuce growth. Despite the variability, chitin remains an environmentally friendly alternative to synthetic fertilizers in lettuce production, but its beneficial effects are dependent on rhizobiome composition, which should be considered before chitin application. [Formula: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Funder

Swiss National Science Foundation

Fonds Wetenschappelijk Onderzoek

University of Zurich

Department of Life Sciences and Facility Management of the Zurich University of Applied Sciences

Publisher

Scientific Societies

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