Genome Resource for the Huanglongbing Causal Agent ‘Candidatus Liberibacter asiaticus’ Strain AHCA17 from Citrus Root Tissue in California, USA-Reference-Cited by-同舟云学术

Genome Resource for the Huanglongbing Causal Agent ‘Candidatus Liberibacter asiaticus’ Strain AHCA17 from Citrus Root Tissue in California, USA

Published:2020-03 Issue:3 Volume:104 Page:627-629
ISSN:0191-2917
Container-title:Plant Disease
language:en
Short-container-title:Plant Disease

Author:

Cai Weili¹²,Nunziata Schyler¹,Costanzo Stefano¹^ORCID,Kumagai Lucita³,Rascoe John¹,Stulberg Michael J.¹^ORCID

Affiliation:

1. United States Department of Agriculture–Animal and Plant Health Inspection Service, Plant Protection and Quarantine, Science and Technology, Beltsville, MD

2. Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC

3. Plant Pests Diagnostics Branch, California Department of Food and Agriculture, Sacramento, CA

Abstract

‘Candidatus Liberibacter asiaticus’ is the unculturable causative agent of citrus huanglongbing disease. Here, we report the first citrus root metagenome sequence containing the draft genome of ‘Ca. L. asiaticus’ strain AHCA17, obtained from a pummelo tree in California. The assembled genome was 1.2 Mbp and resulted in 37 contigs (N50 = 158.7 kbp) containing 1,057 predicted open reading frames and 45 RNA-coding genes. This draft genome will provide a valuable resource in further study of ‘Ca. L. asiaticus’ genome diversity and pathogen epidemiology.

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science

Link

https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-08-19-1735-A

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