Complete Genome Resource of a Fungal Antagonistic Strain: Pseudomonas tohonis

Author:

Luo Wan-Zhen12,Zhu He3,Qi Hong-Yue1,Song Jian1ORCID,Zhang Dan-Dan14,Dai Xiao-Feng14ORCID,Mijiti Maihemuti24,Chen Jie-Yin14ORCID,Han Dongfei56,Wang Dan17ORCID

Affiliation:

1. The State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China

2. College of Agronomy, Xinjiang Agricultural University/Key Laboratory of Prevention and Control of Invasive Alien Species in Agriculture & Forestry of the North-western Desert Oasis (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Urumqi 830052, China

3. National Cotton Industry Technology System Liaohe Comprehensive Experimental Station, The Cotton Research Center of Liaoning Academy of Agricultural Sciences, Liaoning Provincial Institute of Economic Crops, Liaoyang 111000, China

4. Western Agricultural Research Center, Chinese Academy of Agricultural Sciences, Changji 831100, China

5. State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Beijing 100081, China

6. School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou 215009, China

7. State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou 311300, China

Abstract

KRS022 was isolated from the rhizosphere soil of a healthy plant in a pathogen-infested cotton field in Xinjiang, China. Previous studies have demonstrated that KRS022 possesses the ability to trigger plant immune responses, inhibit the growth of various pathogenic fungi, including Verticillium dahliae, and promote plant growth. The antagonistic properties of KRS022 primarily stem from its bioactive metabolites. In this study, the high-quality genome of KRS022 was obtained. The KRS022 genome consists of a chromosome of 6,369,026 bp with 67.09% GC content and possesses 5,830 open reading frames, of which 5,186 genes were annotated, and 119 were ncRNA genes. Additionally, 11 gene clusters of secondary metabolites biosynthesis were predicted, involved in polyketide synthase, arylpolyene, NAGGN, beta-lactone, ranthipeptide, PiPP-like, redox cofactor, and non-ribosomal peptide-synthetase clusters. It could be useful to explore the biocontrol potential of P. tohonis, implying promising application of KRS022 to biological control. [Formula: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Funder

National Key Research and Development Program of China

Special Fund Projects of Central Government Guiding Local Science and Technology Development

Fundamental Research Funds for Central Non-profit Scientific Institution in CAAS

Science and Technology Program of Suzhou

Chinese Academy of Agricultural Sciences

Publisher

Scientific Societies

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