Genome Sequence Resource of the Head Blight Pathogens Fusarium asiaticum and F. graminearum Isolated from Cereal Crops and Gramineous Weeds in Korea and China

Author:

Jeong Eunji1,Lim Jae Yun1,Proctor Robert H.2ORCID,Lee Yin-Won34ORCID,Xu Jianhong4,Shi Jianrong4,Liu Xin4,Seo Jeong-Ah1ORCID

Affiliation:

1. School of Systems Biomedical Science, Soongsil University, Seoul 06978, Republic of Korea

2. National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, U.S. Department of Agriculture, Agricultural Research Service, National Center for Agricultural Utilization Research Mycotoxin Prevention and Applied Microbiology, 1815 N University St., Peoria, IL 61604, U.S.A.

3. Department of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea

4. Jiangsu Key Laboratory for Food Quality and Safety-State Key Laboratory Cultivation Base, Ministry of Science and Technology/Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs/Key Laboratory for Agro-product Safety Risk Evaluation (Nanjing), Ministry of Agriculture and Rural Affairs/Collaborative Innovation Center for Modern Grain Circulation and Safety/Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural...

Abstract

Head blight is a serious fungal disease that results in yield loss and mycotoxin contamination in cereal crops worldwide. Head blight is primarily caused by members of the Fusarium graminearum species complex (FGSC), which consists of at least 16 species, including Fusarium asiaticum and Fusarium graminearum. FGSC members produce trichothecene mycotoxins and can be divided into four groups (chemotypes) depending on the type of trichothecenes produced: NIV (production of nivalenol), 3ADON (production of 3-acetyldeoxynivalenol), 15ADON (production of 15-acetyldeoxynivalenol), and NX-2 (production of 3α-acetoxy, 7α, 15-dihydroxy-12, and 13-epoxytrichothe-9-ene). Whereas F. graminearum mainly causes head blight in wheat-producing areas, F. asiaticum is associated primarily with rice head blight in eastern Asia. To date, the NCBI database archives 116 assembled genome sequences of F. graminearum, but only four accessions correspond to F. asiaticum. Accessions for three F. graminearum strains (PH-1 = NRRL 31084, CS3005, and FG-12) are chromosome assemblies (i.e., include contigs/scaffolds consisting of full-length or nearly full-length chromosomes), but none of the F. asiaticum accessions is a chromosome assembly. This announcement reports the assembled genome sequences of nine F. asiaticum strains and seven F. graminearum strains isolated from rice, wheat, barley, and other gramineous plants in Korea and China. [Formula: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Funder

Korea Institute of Planning and Evaluation for Technology in Food, Agriculture and Forestry

Rural Development Administration

National Natural Science Foundation of China

Special Fund for Risk Assessment of China

Jiangsu Agriculture Science and Technology Independent Innovation Fund

U.S. Department of Agriculture

Agricultural Research Service

Publisher

Scientific Societies

Subject

General Medicine

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