A graphical user interface for RAId, a knowledge integrated proteomics analysis suite with accurate statistics-Reference-Cited by-同舟云学术

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A graphical user interface for RAId, a knowledge integrated proteomics analysis suite with accurate statistics

Published:2018-03-15 Issue:1 Volume:11 Page:
ISSN:1756-0500
Container-title:BMC Research Notes
language:en
Short-container-title:BMC Res Notes

Author:

Joyce Brendan,Lee Danny,Rubio Alex,Ogurtsov Aleksey,Alves Gelio,Yu Yi-Kuo

Funder

U.S. National Library of Medicine

Publisher

Springer Science and Business Media LLC

Subject

General Biochemistry, Genetics and Molecular Biology,General Medicine

Link

http://link.springer.com/content/pdf/10.1186/s13104-018-3289-6.pdf

Reference19 articles.

1. Alves G, Yu Y-K. Robust accurate identification of peptides (raid): deciphering ms$$^2$$ data using a structured library search with de novo based statistics. Bioinformatics. 2005;21:3726–32.

2. Alves G, Ogurtsov AY, Yu YK. RAId_DbS: peptide identification using database searches with realistic statistics. Biol Direct. 2007;2:25.

3. Alves G, Yu YK. Statistical characterization of a 1D random potential problem—with applications in score statistics of MS-based peptide sequencing. Physica A. 2008;387(26):6538–44.

4. Alves G, Ogurtsov AY, Yu YK. RAId_aPS: MS/MS analysis with multiple scoring functions and spectrum-specific statistics. PLoS ONE. 2010;5(11):15438.

5. Park CY, Klammer AA, Kall L, MacCoss MJ, Noble WS. Rapid and accurate peptide identification from tandem mass spectra. J Proteome Res. 2008;7(7):3022–7.

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