Identification of the expression patterns and potential prognostic role of m6A-RNA methylation regulators in Wilms Tumor
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Published:2023-09-21
Issue:1
Volume:16
Page:
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ISSN:1755-8794
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Container-title:BMC Medical Genomics
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language:en
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Short-container-title:BMC Med Genomics
Author:
Jia Changlin,Gao Hongjie,Ma Wenyue,Liu Xiaoya,Chang Mengmeng,Sun Fengyin
Abstract
Abstract
Background
To explore the potential role of m6A methylation modification in Wilms Tumor (WT) by m6A-RNA Methylation (m6A) regulators.
Methodology
The association of m6A modification patterns with immune and prognostic characteristics of tumors was systematically evaluated using 19 m6A regulators extracted from Wilms Tumor’s samples in public databases. A comprehensive model of “m6Ascore” was constructed using principal component analysis, and its prognostic value was evaluated.
Results
Almost all m6A regulators were differentially expressed between WT and normal tissues. Unsupervised clustering identified three distinct m6A clusters that differed in both immune cell infiltration and biological pathways. The m6Ascore was constructed to quantify m6A modifications in individual patients. Our analysis suggests that m6Ascore is an independent prognostic factor for WT and can be used as a novel predictor of WT prognosis.
Conclusions
This study comprehensively explored and systematically characterized m6A modifications in WT. m6A modification patterns play a critical role in the tumor immune microenvironment (TIME) and WT prognosis. m6Ascore provides a more comprehensive understanding of m6A modifications in WT and offers a practical tool for predicting WT prognosis. This study will help clinicians to identify valid indicators of WT to improve the poor prognosis of this disease.
Supplementary Information
The online version contains supplementary material available at https://www.aliyundrive.com/drive/folder/64be739cd6956a741fb24670baeea53422be6024.
Funder
Natural Science Foundation of Shandong Province
Key Research and Development Plan of Shandong Province
Publisher
Springer Science and Business Media LLC
Subject
Genetics (clinical),Genetics