A cubic algorithm for the generalized rank median of three genomes
Author:
Funder
NSERC
FAPESP
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computational Theory and Mathematics,Molecular Biology,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/s13015-019-0150-y.pdf
Reference20 articles.
1. Chindelevitch L, Zanetti JPP, Meidanis J. On the rank-distance median of 3 permutations. BMC Bioinform. 2018;19(Suppl 6):142.
2. Coppersmith D, Winograd S. Matrix multiplication via arithmetic progressions. J Symb Comput. 1990;9(3):251.
3. Tannier E, Zheng C, Sankoff D. Multichromosomal median and halving problems under different genomic distances. BMC Bioinform. 2009;10:120.
4. Feijao P, Meidanis J. SCJ: a breakpoint-like distance that simplifies several rearrangement problems. IEEE/ACM Trans Comput Biol Bioinform. 2011;8(5):1318–29.
5. Caprara A. Formulations and hardness of multiple sorting by reversals. In: Proceeding 3rd annual international conference on research in computational molecular biology. New York: ACM Press; 1999. p. 84–94.
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