Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys

Author:

Bolser Dan M,Filippis Ioannis,Stehr Henning,Duarte Jose,Lappe Michael

Publisher

Springer Science and Business Media LLC

Subject

Structural Biology

Cited by 8 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. COMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming;Proteins: Structure, Function, and Bioinformatics;2016-01-20

2. Distance dependency and minimum amino acid alphabets for decoy scoring potentials;Journal of Computational Chemistry;2012-09-01

3. Amino acid interaction preferences in helical membrane proteins;Protein Engineering Design and Selection;2011-06-10

4. Novel Nonlinear Knowledge-Based Mean Force Potentials Based on Machine Learning;IEEE/ACM Transactions on Computational Biology and Bioinformatics;2011-03

5. Backbones of Folded Proteins Reveal Novel Invariant Amino Acid Neighborhoods;Journal of Biomolecular Structure and Dynamics;2011-02

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