Remote surveillance and detection of SARS-CoV-2 transmission among household members in King County, Washington

Author:

Emanuels Anne,Casto Amanda M.,Heimonen Jessica,O’Hanlon Jessica,Chow Eric J.,Ogokeh Constance,Rolfes Melissa A.,Han Peter D.,Hughes James P.,Uyeki Timothy M.,Frazar Christian,Chung Erin,Starita Lea M.,Englund Janet A.,Chu Helen Y., ,Boeckh Michael,Famulare Michael,Lutz Barry R.,Nickerson Deborah A.,Rieder Mark J.,Thompson Matthew,Shendure Jay,Bedford Trevor,Adler Amanda,Brandstetter Elisabeth,Burstein Roy,Cho Shari,Geyer Rachel E.,Hadfield James,Jackson Michael L.,Kiavand Anahita,Kim Ashley E.,Kimball Louise E.,Kotnik Jack Henry,Lacombe Kirsten,Logue Jennifer K.,Lyon Victoria,McCulloch Denise J.,Richardson Matthew,Rogers Julia H.,Sibley Thomas R.,Zigman Suchsland Monica L.,Truong Melissa,Wolf Caitlin R.,Zhong Weizhi

Abstract

Abstract Background Early during the COVID-19 pandemic, it was important to better understand transmission dynamics of SARS-CoV-2, the virus that causes COVID-19. Household contacts of infected individuals are particularly at risk for infection, but delays in contact tracing, delays in testing contacts, and isolation and quarantine posed challenges to accurately capturing secondary household cases. Methods In this study, 346 households in the Seattle region were provided with respiratory specimen collection kits and remotely monitored using web-based surveys for respiratory illness symptoms weekly between October 1, 2020, and June 20, 2021. Symptomatic participants collected respiratory specimens at symptom onset and mailed specimens to the central laboratory in Seattle. Specimens were tested for SARS-CoV-2 using RT-PCR with whole genome sequencing attempted when positive. SARS-CoV-2-infected individuals were notified, and their household contacts submitted specimens every 2 days for 14 days. Results In total, 1371 participants collected 2029 specimens that were tested; 16 individuals (1.2%) within 6 households tested positive for SARS-CoV-2 during the study period. Full genome sequences were generated from 11 individuals within 4 households. Very little genetic variation was found among SARS-CoV-2 viruses sequenced from different individuals in the same household, supporting transmission within the household. Conclusions This study indicates web-based surveillance of respiratory symptoms, combined with rapid and longitudinal specimen collection and remote contact tracing, provides a viable strategy to monitor households and detect household transmission of SARS-CoV-2. Trial registration identifier NCT04141930, Date of registration 28/10/2019.

Publisher

Springer Science and Business Media LLC

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