Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning-Reference-Cited by-同舟云学术

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Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning

Published:2017-12 Issue:1 Volume:10 Page:
ISSN:1756-8935
Container-title:Epigenetics & Chromatin
language:en
Short-container-title:Epigenetics & Chromatin

Author:

Gutiérrez Gabriel,Millán-Zambrano Gonzalo,Medina Daniel A.,Jordán-Pla Antonio,Pérez-Ortín José E.,Peñate Xenia,Chávez Sebastián^ORCID

Funder

Ministerio de Economía y Competitividad

Consejería de Economía, Innovación, Ciencia y Empleo, Junta de Andalucía

Generalitat Valenciana

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Molecular Biology

Link

http://link.springer.com/content/pdf/10.1186/s13072-017-0165-x.pdf

Reference66 articles.

1. Reeve JN, Sandman K, Daniels CJ. Archaeal histones, nucleosomes, and transcription initiation. Cell. 1997;89:999–1002.

2. Kornberg RD. Chromatin structure: a repeating unit of histones and DNA. Science. 1974;184:868–71.

3. Luger K, Mader AW, Richmond RK, Sargent DF, Richmond TJ. Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature. 1997;389:251–60.

4. Chang HW, Kulaeva OI, Shaytan AK, Kibanov M, Kuznedelov K, Severinov KV, Kirpichnikov MP, Clark DJ, Studitsky VM. Analysis of the mechanism of nucleosome survival during transcription. Nucleic Acids Res. 2014;42:1619–27.

5. Jordan-Pla A, Gupta I, de Miguel-Jimenez L, Steinmetz LM, Chavez S, Pelechano V, Perez-Ortin JE. Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle. Nucleic Acids Res. 2015;43:787–802.

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