ReCoil - an algorithm for compression of extremely large datasets of dna data-Reference-Cited by-同舟云学术

ReCoil - an algorithm for compression of extremely large datasets of dna data

Published:2011-10-11 Issue:1 Volume:6 Page:
ISSN:1748-7188
Container-title:Algorithms for Molecular Biology
language:en
Short-container-title:Algorithms Mol Biol

Author:

Yanovsky Vladimir

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computational Theory and Mathematics,Molecular Biology,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1748-7188-6-23.pdf

Reference18 articles.

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2. Ma Bin, Tromp John, Li Ming: PatternHunter: faster and more sensitive homology search. Bioinformatics. 2002, 18 (3): 440-445. 10.1093/bioinformatics/18.3.440

3. Timothy White W, Hendy Michael: Compressing DNA sequence databases with coil. BMC Bioinformatics. 2008, 9 (1): 242- 10.1186/1471-2105-9-242

4. Mäkinen Veli, Navarro Gonzalo, Sirén Jouni, Välimäki Niko: Storage and retrieval of individual genomes. Recomb. 2009, 121-137.

5. Ferragina P, González R, Navarro G, Venturini R: Compressed Text Indexes: From Theory to Practice. ACM Journal of Experimental Algorithmics (JEA). 2009, 30-13:article 12

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