TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequences-Reference-Cited by-同舟云学术

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TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequences

Published:2016-10-26 Issue:1 Volume:17 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Hung Sheng-Jou,Chen Yi-Lin,Chu Chia-Hung,Lee Chuan-Chun,Chen Wan-Li,Lin Ya-Lan,Lin Ming-Ching,Ho Chung-Liang,Liu Tsunglin

Funder

Ministry of Science and Technology, Taiwan (TW)

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-016-1304-2.pdf

Reference35 articles.

1. Murphy K, Travers P, Walport M, Janeway C. Janeway’s immunobiology. 8th ed. New York: Garland Science; 2012.

2. Rowen L, Koop BF, Hood L. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. Science. 1996;272(5269):1755–62.

3. Schatz DG, Ji Y. Recombination centres and the orchestration of V(D)J recombination. Nat Rev Immunol. 2011;11(4):251–63.

4. Benedict CL, Gilfillan S, Thai TH, Kearney JF. Terminal deoxynucleotidyl transferase and repertoire development. Immunol Rev. 2000;175:150–7.

5. Giudicelli V, Chaume D, Lefranc MP. IMGT/V-QUEST, an integrated software program for immunoglobulin and T cell receptor V-J and V-D-J rearrangement analysis. Nucleic Acids Res. 2004;32(Web Server issue):W435–40.

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