A machine learning approach for viral genome classification
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/s12859-017-1602-3.pdf
Reference53 articles.
1. Van Belkum A, Struelens M, de Visser A, Verbrugh H, Tibayrenc M. Role of genomic typing in taxonomy, evolutionary genetics, and microbial epidemiology. Clin Microbiol Rev. 2001; 14(3):547–60.
2. Struck D, Lawyer G, Ternes AM, Schmit JC, Bercoff DP. Comet: adaptive context-based modeling for ultrafast hiv-1 subtype identification. Nucleic Acids Res. 2014; 42(18):e144.
3. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Res. 1997; 25(17):3389–402.
4. Edgar RC. Search and clustering orders of magnitude faster than blast. Bioinformatics. 2010; 26(19):2460–1.
5. Bao Y, Chetvernin V, Tatusova T. Improvements to pairwise sequence comparison (PASC): a genome-based web tool for virus classification. Arch Virol. 2014; 159(12):3293–304.
Cited by 51 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. MICROPHERRET: MICRObial PHEnotypic tRait ClassifieR using Machine lEarning Techniques;Environmental Microbiome;2024-08-08
2. Genomics for Arbovirus Surveillance: Considerations for Routine Use in Public Health Laboratories;Viruses;2024-08-02
3. A machine learning algorithm for the automatic classification of Phytophthora infestans genotypes into clonal lineages;Applications in Plant Sciences;2024-07-23
4. Deepvirusclassifier: a deep learning tool for classifying SARS-CoV-2 based on viral subtypes within the coronaviridae family;BMC Bioinformatics;2024-07-05
5. Automated classification of giant virus genomes using a random forest model built on trademark protein families;npj Viruses;2024-03-08
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3