Characterization and visualization of RNA secondary structure Boltzmann ensemble via information theory
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/s12859-018-2078-5.pdf
Reference49 articles.
1. Shapiro BA, Yingling YG, Kasprzak W, Bindewald E. Bridging the gap in RNA structure prediction. Curr Opin Struct Biol. 2007; 17(2):157–65. https://doi.org/10.1016/j.sbi.2007.03.001 .
2. Mathews DH. Revolutions in RNA secondary structure prediction. J Mol Biol. 2006; 359(3):526–32. https://doi.org/10.1016/j.jmb.2006.01.067 .
3. Bernhart SH, Hofacker IL, Will S, Gruber AR, Stadler PF. RNAalifold: improved consensus structure prediction for RNA alignments. BMC Bioinformatics. 2008; 9(1):474. https://doi.org/10.1186/1471-2105-9-474 .
4. Xu Z, Mathews DH. Multilign: an algorithm to predict secondary structures conserved in multiple RNA sequences. Bioinformatics. 2011; 27(5):626–32. https://doi.org/10.1093/bioinformatics/btq726 .
5. Hofacker IL. Vienna RNA secondary structure server. Nucleic Acids Res. 2003; 31(13):3429–31.
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